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7 commits

Author SHA1 Message Date
Research Assistant
0505fd2fda feat: add paperforge setup CLI command, one-click install script, sync __version__ to 1.4.0, detect local version from pip metadata 2026-04-27 21:34:03 +08:00
Research Assistant
94f00e990a fix: sync paperforge.json version to 1.4.0; fix update.py missing GITHUB_REPO/GITHUB_ZIP imports; remove PaperForge.base generation (duplicates Literature Hub) 2026-04-27 21:25:00 +08:00
Research Assistant
7cccf4eefc refactor(17-dead-code-precommit): remove delegation wrappers and dead code, run ruff cleanup 
- Remove def load_vault_config delegation wrappers from all 7 worker modules
- Add from paperforge.config import load_vault_config, paperforge_paths at module level
- Remove unused system_dir/resources_dir/control_dir extraction in pipeline_paths
- Fix sync.py intra-function imports (run_selection_sync, run_index_refresh)
- Fix repair.py import path for _resolve_formal_note_path (direct from _utils)
- Add ruff and pre-commit as test dependencies in pyproject.toml
- Configure per-file ruff ignores for pre-existing issues
- Run ruff check --fix + ruff format (353 + 58 issues auto-fixed)
- All 203 tests pass, ruff check zero warnings
 2026-04-27 17:40:47 +08:00
Research Assistant
492c4c2790 feat(13-logging-foundation): migrate diagnostic print() calls to logger.*() 
- repair.py: 10 [repair]-tagged diagnostic prints migrated to logger.error/info/warning with printf-style formatting
- commands/ocr.py: 4 [INFO]/[WARN] diagnostic prints migrated to logger.info/warning
- worker/update.py: _log() and _color() functions removed; all 36 _log() call sites migrated to logger.*()
- All user-facing stdout print() calls preserved (4 in repair.py, 6 in commands/ocr.py _diagnose(), 2 in update.py for pip/git output)
- All migrated calls use printf-style %%s/%%d formatting for lazy evaluation
 2026-04-27 15:12:04 +08:00
Research Assistant
e0dbfeccec feat(13-logging-foundation): add module-level logger to all 12 worker and command modules 
- Added import logging and logger = logging.getLogger(__name__) to:
  worker: repair, deep_reading, ocr, sync, status, base_views, update
  commands: ocr, repair, deep, sync, status
- 12 of 13 planned files completed (paperforge/update.py does not exist on disk - skipped)
- Verified all logger instances resolve to correct hierarchical names
 2026-04-27 15:07:32 +08:00
Research Assistant
ec2e91d4ac feat(update): smart update with auto-detection + Windows one-click script 
paperforge update:
- Auto-detects installation method (pip/pip-editable/git/zip)
- Routes to appropriate update strategy
- pip users: pip install --upgrade
- pip-editable users: git pull + pip install -e .
- git users: git pull
- unknown: zip download fallback

scripts/update-paperforge.ps1:
- Windows one-click update script
- Auto-detects install method
- Supports -Force (skip confirm) and -DryRun
- Clear colored output with error handling

AGENTS.md:
- Added comprehensive update section with 4 methods
- Documented auto-update and PowerShell script
 2026-04-25 00:17:54 +08:00
Research Assistant
498a9edfe5 feat(phase-12): extract worker modules from literature_pipeline.py 
- Create paperforge/worker/ package with sync.py, ocr.py, repair.py,
  status.py, deep_reading.py, update.py, base_views.py
- Update paperforge/commands/*.py to import from new worker modules
- Update paperforge/cli.py _import_worker_functions for new paths
- Update paperforge/config.py ld_deep_script resolution with fallback
- Update setup_wizard.py for new worker/skills paths
- Add function-level imports to break circular dependencies
 2026-04-24 22:32:25 +08:00